Having had the infection earlier this year (no jokes, kids), I would concur with NickB and say it sounds like acetobacter. If that's what you are describing, you will know soon enough by the taste - a better indication than just the smell of the draughted sample.
At the time of mine, some people suggested i rack off from under the layer of skin, and bottle it anyway - but I found that it was simply too bad to consider.
If indeed this is what you have contracted, or at least if you're sure it's fucked, just tip it. At the end of the day it's no big deal, when a new brew's a weekend away.
Just make sure you clean all of your gear very, very well. Then repeat the regime. Then repeat again.