Out of curiosity, have you been using chlorinated bleach in and around your brewery? It could be that you're picking up chlorophenols esp if fermenting in plastic (even foodgrade) which is permeable.
I read you're filtering brewing water to remove the potential of chlorinated contaminant, but how about rinsing? Are you using filtered/boiled water with no-rinse sanitisers for final rinse in ferms and equipment (eg saniclean, iodophor, etc )?
Hate to throw more obvious suggestions out there, as you've seemingly been through all of them, as you say.. knew a guy who used chlorinated bleach to combat black mold on the wall of his pro brewery- took down over $20K in beer and another 10K or more in analysis to identify the culprit. of course his tanks were SS, etc. but his big mistake was stepping starters in a 30L plastic screw lid ferm.. by the time he pitched and repitched slurry, etc. he'd done his damage affecting every tank and weeks of conditioning, some to bottle and so on. He shut it down and moved his product to contract.
reVox